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(CNN) — A growing pilot and passenger revolt over full-body scans and what many consider intrusive pat-downs couldn’t have come at a worse time for the nation’s air travel system.

Thanksgiving, the busiest travel time of the year, is less than two weeks away.

Grassroots groups are urging travelers to either not fly or to protest by opting out of the full-body scanners and undergo time-consuming pat-downs instead.

Such concerns prompted a meeting Friday of Homeland Security Secretary Janet Napolitano with leaders of travel industry groups.

Napolitano met with the U.S.Travel Association and 20 travel companies “to underscore the Department’s continued commitment to partnering with the nation’s travel and tourism industry to facilitate the flow of trade and travel while maintaining high security standards to protect the American people,” the department said in a statement.